Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916540.1_cds_XP_016466266.1_59136
CDS Infomation

[gene=LOC107789016] [db_xref=GeneID:107789016] [protein=auxin efflux carrier component 3-like isoform X2] [protein_id=XP_016466266.1] [location=complement(join(4010..4076,4167..4243,4707..4864,5337..5422,5565..5829,5944..7138))] [gbkey=CDS]
Sequence

ATGATATCTTGGCACGATCTTTATGTTGTCTTGACAGCAGTTGTTCCTCTATATGTGGCC
ATGATCTTGGCCTATGGCTCAGTCCGATGGTGGAAAATCTTCTCCCCTGATCAATGCTCC
GGCATCAACCGTTTCGTCGCCATTTTCGCCGTCCCCTTATTGTCTTTCCACTTCATTTCA
ATGAACAATCCTTATGAAATGAACTTCCGTTTCATTGCTGCTGACACACTACAAAAAATC
ATCATGTTAGTAGTGTTATGTTTATGGGCTAACTTGACCAAAAATGGTAGTCTTGAATGG
AGCATAACAATTTTCTCACTTTCAACTCTTCCTAATACACTTGTAATGGGAATTCCTTTG
TTAATTGCAATGTATGGTGAGTATTCAGGTAGTTTAATGGTACAAGTTGTGGTGTTACAA
TGTATTATTTGGTACACCCTTTTGCTTTTCTTGTTCGAATATCGCGGCGCAAAGATGTTG
ATCATGGAACAATTCCCTGAAACAGCAGGGGAAATTGTTTCATTAAAAGTTGAATCTGAT
GTTGTTTCCTTAGATGGCCAAGATTTTCTTGAAACAGACGCTGAAATAGGCCAAGATGGT
AAACTTCATGTCACTGTACGAAAATCGAATGTGTCAAGAAAGTCATTTGCTATGACACCT
AGGCCATCAAATCTTACTGGAGCTGAAATTTATAGCTTAAGTTCATCAAGAAATCCAACT
CCAAGAGGGTCTAATTTCAACCACACCGATTTTTACGCGATGATGGGGTTTCCAGGAAGG
TTATCAAATTTTGGTCCCGCGGATACAACTCCTAGACCATCTAATTTTGAAGAAAACTGT
GCTCAGGGAGCTCTAACTCAGAGCTCCCCGAGGTTCGGATTCTACCCTGCACAGTCTAAT
TTGCCGGCTTCTTATCCGGCCCCAAATCCGGAAATTGCTTCTATAGTTCCTAAAAGCACG
AAAATTCAGCAACAAGTACATTTACAGCAACATCAGAATGGTAGGGCTAGCCATGATGCT
AAGGAGCTCCATATGTTTGTCTGGAGCTCCAGTGCTTCACCAGTGTCGGAGGCCGCAGGC
CTCCACATGTTTGGTGGCACTGATTTTGGTGCTAACGAACAATCTTGTCGGTCTGATGGT
GCCAAAGAAATCAGAATGTTGATTTCTGATCACCCTCAAAATGGAGATAACAAAGTTAGT
GACTTTGGTGGTGAAGAATTCAGTTTTGGAGGTGTTATTGTTGATGGGAAGGATAGAGAT
GAAAAAAAGGAAGAGAAAGAGGGTCTCACCGGATTACACACCAAGGCTGCCGGAGTTCAA
GATTCCGGTGCCGGAAAACAGATGCCTCCGGCCAGTGTTATGACACGTTTGATTTTAATC
ATGGTTTGGCGCAAGCTTATCCGAAACCCGAACACCTATTCGAGCCTCATTGGTCTAATT
TGGTCCCTAATATCGTACCGGTGGCATGTGCATATGCCAAAAATAATGGAGAAGTCAATC
TCTATTCTCTCTGACGCTGGCCTTGGAATGGCTATGTTTAGCTTAGGTTTATTTATGGCA
CTTCAACCTAAGATAATAGCATGTGGGAACACAGTGGCTGCTTTCGCAATGGCTGTGAGA
TTTCTAACTGGCCCAGCAGTTATGGCTGCAGCTTCAATTATCGTTGGCCTTCGTGGTACG
CTCCTCCATGTCGCCATTGTACAGGCTGCATTGCCGCAAGGGATTGTTCCGTTTGTGTTT
GCTAAGGAGTACAATGTTCATCCGGCTATTCTTAGCACTGCGGTTATTTTTGGAATGTTG
ATAGCATTACCAATCACATTAGTCTACTACATTATCCTTGGATTATAA

Peptide Sequence

PEP ID

XP_016466266.1
PEP Infomation

PREDICTED: auxin efflux carrier component 3-like isoform X2 [Nicotiana tabacum]
Sequence

MISWHDLYVVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS
MNNPYEMNFRFIAADTLQKIIMLVVLCLWANLTKNGSLEWSITIFSLSTLPNTLVMGIPL
LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAGEIVSLKVESD
VVSLDGQDFLETDAEIGQDGKLHVTVRKSNVSRKSFAMTPRPSNLTGAEIYSLSSSRNPT
PRGSNFNHTDFYAMMGFPGRLSNFGPADTTPRPSNFEENCAQGALTQSSPRFGFYPAQSN
LPASYPAPNPEIASIVPKSTKIQQQVHLQQHQNGRASHDAKELHMFVWSSSASPVSEAAG
LHMFGGTDFGANEQSCRSDGAKEIRMLISDHPQNGDNKVSDFGGEEFSFGGVIVDGKDRD
EKKEEKEGLTGLHTKAAGVQDSGAGKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLI
WSLISYRWHVHMPKIMEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNTVAAFAMAVR
FLTGPAVMAAASIIVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGML
IALPITLVYYIILGL

Transcript Sequence

Gene sequence data has not been registered.